Technical Reference #1618
Glass Bottom Culture Dishes
This study used MatTek product(s):
Citation in paper containing MatTek reference:
35 mm dishes (MatTek Corporation; Ashland; MA) 
1618. |
In Vitro Guidance of Retinal Axons by a Tectal Lamina-Specific Glycoprotein Nel
Yulan Jiang; Hiroya Obama; Soh Leh Juan; Ritsuko Nakamura; Chizu Nakamotot; Zhufeng Ouyang; Masaru Nakamoto,
University of Aberdeen,
Molecular and Cellular Neuroscience,
41(1618),
(2009)
Abstract:
Nel is a glycoprotein containing five chordin-like and six epidermal growth factor-like domains and isstrongly expressed in the nervous system. In this study we have examined expression patterns and in vitrofunctions of Nel in the chicken retinotecta Materials & Methods:
Chick embryos
Fertilized White Leghorn chicken eggs were purchased from
Charles River SPAFAS (North Franklin CT) and Henry Stewart
(England) and incubated at 38 °C until use.
Northern blot analyses
Total RNA was prepared from embryonic chicken tecta by using
Trizol reagent (Invitrogen Carlsbad CA) separated in 1% formaldehyde
agarose gels and transferred to nylon membranes. The
membranes were hybridized with a digoxigenin-labeled DNA probe
prepared from the full coding region of chicken Nel cDNA. Chemiluminescence
detection using alkaline phosphatase-conjugated antidigoxigenin
antibody (Roche Applied Science Indianapolis IN) was
performed according to the manufacture's instructions.
Construction expression and purification of Nel-AP
For preparation of a fusion protein of Nel with an alkaline
phosphatase tag (Nel-AP) chicken Nel cDNA (from nucleotide 103
to 2565 (Matsuhashi et al. 1996); GenBank accession NM 001030740)
was amplified from chicken embryo cDNA by polymerase chain
reaction and inserted between the BamHI and MluI sites of the pCMVAP
vector. Nel-AP and AP expression constructs were transfected into
HEK293T cells using the FuGENE transfection reagent (Roche Applied
Science). After 3–4 days the supernatants containing Nel-AP or AP
were collected and applied to an anti-AP antibody column. After
washing Nel-AP and AP were eluted with 0.1 M glycine–HCl (pH 2.5)
neutralized with 0.75 M Tris–HCl (pH 8.8) and dialyzed against PBS.
Concentrations of Nel-AP and AP were evaluated by the Bradford
assay SDS-PAGE Western blot using anti-AP antibody and by
measuring AP activity (Flanagan et al. 2000) and comparable
concentrations were used. Heat inactivation of Nel-AP (HI-Nel-AP)
was performed at 65 °C for 30 min. Since the human placental alkaline
phosphatase used as a tag is heat stable this treatment does not affect
the enzyme activity (Flanagan et al. 2000).
Affinity probe in situ
Affinity probe in situ using Nel-AP was performed essentially as
previously described (Flanagan et al. 2000). Briefly unfixed tissues
and explants were incubated with Nel-AP AP or HI-Nel-AP for 30 min
at room temperature. After washing cells were fixed with 8%
formaldehyde for 3 min washed and heated for 60 min at 65 °C to
inactivate endogenous APs. Nel-AP binding was detected by incubation
with 5-bromo-4-choloro-3-indolyl phosphate/nitroblue tetrazolium
(BCIP/NBT) or with Cy3-conjugated donkey anti-AP antibody
(1:200; Jackson Immuno Research Laboratories West Grove PA). In
some experiments cell nuclei were counter-stained with 4′6′-
diamidino-2-phenylindole (DAPI).
Production and purification of anti-Nel polyclonal antibodies
An adult New Zealand white rabbit was immunized with Nel-AP
and antisera were collected according to the standard immunization
protocol of the Hybridoma Core Facility of Lerner Research Institute.
Antisera were first applied to an AP column to remove the antibodies
against AP and the flow-through fraction was applied to a Nel-AP
column for affinity purification of anti-Nel antibodies.
In situ RNA hybridization histology and immunohistochemistry
For in situ RNA hybridization two separate anti-sense probes for
chicken Nel were used. Both probes gave similar results. One
fragment extends from a PstI site at nucleotide 203 to a HindIII site
at nucleotide 1028 and the other was from the HindIII site to a KpnI
site at nucleotide 1854. In situ hybridization was performed as
described previously (Nishida et al. 2002) using digoxigeninlabeled
RNA probes. For immunohistochemistry sections were
treated with rabbit anti-Nel antibody (0.1 μg/ml) and then with
biotin-conjugated donkey anti-rabbit IgG (1:500; Jackson Immuno
Research). Detection was performed using the standard ABC method
(Vector Laboratories Burlingame CA). 30 μm cryosections of
embryonic chicken tectum were used for both RNA in situ hybridization
and immunohistochemistry.
Immunoblot analyses
Embryonic chicken tecta were homogenized in cold lysis buffer
(50mMHEPES (pH 7.4) 50mMNaCl1% Triton X-100 5mMEDTA1×
protease inhibitor mixture (Sigma-Aldrich St. Louis MO) 2 mM
sodium vanadate 25mMsodium fluoride) and centrifuged for 10 min
at 15000 ×g to remove insoluble material. The lysates were separated
by SDS-PAGE (7.5% polyacrylamide gel) and the proteins were
transferred onto Immobilon-P PVDF membrane (Millipore Billerica
MA). The filters were blocked with 5% skim milk in PBS containing
0.05% Triton X-100 and treated with rabbit anti-Nel antibody (0.1 μg/
ml) and then with HRP-conjugated donkey anti-rabbit IgG (1:40000;
Jackson Immuno Research Laboratories). As a control anti-β-actin
antibody (1:10000; Sigma) and HRP-conjugated donkey anti-mouse
IgG (1:40000; Jackson Immuno Research Laboratories) were used.
The ECL plus system (Amersham Piscataway NJ) was used for
detection.
Tissue culture and axon outgrowth assays
Retinal explantswere prepared as described previously (Nakamoto
et al.1996). Briefly retinaewere dissected from E6 chick and flattened
onto cellulose nitrate filters (0.45 μm pore size Sartorius). The filters
with retinae were cut into 300 μmwide strips using a McIllwain tissue
chopper. Olfactory bulbs were dissected out from E10 chick embryos
and cut into small pieces. Retinal strips and olfactory bulb tissues were
put on a Nucleopore membrane (Whatman Clifton NJ) that was first
coated with 50 μg/ml of laminin and then with 25 μg/ml of Nel-AP AP
or HI-Nel-AP. Explants were cultured in the retinal culture medium
(DMEM:F12=1:1 10% fetal bovine serum 5% calf serum 1%
penicillin/streptomycin 0.6% glucose). After 48 h axons were labeled
by incubating the cultures in 33 μM carboxylfluorescein diacetate
succinimidyl ester (Molecular Probes Eugene OR) for 5 min. Axon
outgrowth for each explant was scored on a graded 0 to 3 scale in
which 0 was no or very sparse outgrowth from a living explant and 3
was very robust outgrowth.
Axon outgrowth assays of dissociated retinal ganglion cells were
performed according to the protocol of Stepanek et al. (2001) except
that we analyzed only neurofilament and Islet-1 double positive cells.
35 mm dishes (MatTek Corporation Ashland MA) were coated with
10 μg/ml of laminin for 1 h and then with 25 μg/ml of Nel-AP AP or
HI-Nel-AP for 30 min. The dishes were rinsed and blocked with the
retinal culture medium. Dissociated retinal cells were plated at 1×105
cells/dish and allowed to growovernight before fixation. After antigen
retrieval the cells were incubated with rabbit anti-neurofilament
antibody (1:200 Millipore Billerica MA) and anti-Islet 1 antibody
(4D51:100 Developmental Studies Hybridoma Bank at the University
of Iowa) and then with Alexa Fluor 594-conjugated donkey antirabbit
IgG (2 μg/ml Invitrogen Paisley Scotland) and Alexa Fluor
488-conjugated donkey anti-mouse IgG (5 μg/ml Invitrogen). In each dish the lengths of at least 15 axons from double stained cells were
measured. The assay was repeated three times.
Growth cone collapse assays
Growth cone collapse assays were performed essentially as
described previously (Goshima et al. 1995). Retinal explants were
prepared from E6 chick and cultured for 18 h on glass coverslips
coated with 100 μg/ml of laminin in 24-well plates in the retinal
culture medium. Then Nel-AP or control AP or HI-Nel-APwas added to
the culture. The cells were incubated at 37 °C for up to 30 min fixed
and stained with Alexa Fluor 488 Phalloidin (Invitrogen). In each
experiment at least 30 growth cones were scored for each treatment
as collapsed or not collapsed and three independent experiments
were performed. In a separate set of experiments growth cone
behavior was directly observed under phase contrast microscopy
during treatment with AP and Nel-AP.
Statistical analyses
Statistical significance of the data was determined using Student's
t-test. Microscopic Technique
Phase Contrast Microscopy Cell Type(s)
HEK-293 |